As you jack up, the bag will expand it just won't be full of air! You will still need to lift the full suspension travel....
You can support on stands and close doors, but the system *may* not like you afterwards as it will sense the wheel lifted is higher than the rest, then try to deflate the air bag to lower the car, if that fails, it may start to inflate the other air bags to raise the vehicle up to match (this could lead to an unstable car with it moving about will jacked) when it realises it can't level the vehicle, it *may* throw a fault code.
If you need to leave the vehicle jacked on stands, best option is to get in the car, press the centre console locking button (to lock ALL the doors and Tail Gate) then open the drivers door using the handle (pull twice), open the bonnet, disconnect the battery, close bonnet then lock the drivers door using the key (OH - Make sure the key works in the lock first!).
This way you can lock the vehicle with the battery disconnected, and the ECU will be none the wiser.....
When finished, before you lower the car, unlock the car using the key in the door lock, leave door open, open the bonnet, reconnect battery, lower the car to the ground off the jack, start the engine, it will boing and moan about EAS failure, turn steering lock to lock to reset the Steering Angle Sensor, this will clear the EAS and ABS/HDC warnings, close the door and let the car settle - Note: due to the suspension geometery, it will not fully settle until you have driven it a hundred yards or so.....
But in any case, unless you lift on the lower wishbone (not advised) you will have to lift the full height of the suspension.